Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Pyrroloquinoline quinone biosynthesis protein C ; Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ (242 aa)
Predicted Functional Partners:
Pyrroloquinoline quinone biosynthesis protein E (375 aa)
Pyrroloquinoline quinone biosynthesis protein B ; May be involved in the transport of PQQ or its precursor to the periplasm (303 aa)
Coenzyme PQQ biosynthesis protein PqqD (90 aa)
Radical SAM domain protein (378 aa)
PQQ-dependent dehydrogenase, methanol/ethanol family (618 aa)
PQQ-dependent dehydrogenase, methanol/ethanol family (604 aa)
Transport permease protein (267 aa)
Pyrroloquinoline quinone biosynthesis protein A ; Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide (24 aa)
Beta-lactamase domain-containing protein (293 aa)
Radical SAM domain protein (323 aa)
Your Current Organism:
NCBI taxonomy Id: 697282 Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96