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STRINGSTRING
Mettu_3239 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3239" - PFAM: Cytochrome d1, haem region in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3239PFAM- Cytochrome d1, haem region; Cytochrome c, class I; KEGG- rme-Rmet_3331 cytochrome d1, heme region (526 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
  0.977
Mettu_3241
KEGG- cti-RALTA_B2050 C-type cytochrome c55X precursor (101 aa)
 
  0.969
Mettu_3248
KEGG- dar-Daro_3261 radical SAM family protein; PFAM- Radical SAM; SMART- Elongator protein 3/MiaB/NifB (378 aa)
 
  0.968
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
   
  0.967
Mettu_3245
KEGG- tbd-Tbd_0074 AsnC family transcriptional regulator; overlaps another CDS with the same product name (165 aa)
 
   
  0.952
Mettu_3246
SMART- Transcription regulator, AsnC-type; KEGG- tbd-Tbd_0073 AsnC family transcriptional regulator; overlaps another CDS with the same product name (147 aa)
 
   
  0.945
Mettu_3247
SMART- Transcription regulator, AsnC-type; KEGG- tbd-Tbd_0072 AsnC family transcriptional regulator (184 aa)
 
   
  0.938
Mettu_3244
KEGG- dar-Daro_3269 AsnC family transcriptional regulator (152 aa)
 
   
  0.936
Mettu_1179
Nitrate reductase; KEGG- hch-HCH_05823 anaerobic dehydrogenase; PFAM- Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (897 aa)
   
  0.903
Mettu_0005
Manually curated; TIGRFAM- Oxidoreductase alpha (molybdopterin) subunit; KEGG- bbt-BBta_3664 putative oxidoreductase alpha (molybdopterin) subunit; PFAM- Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (793 aa)
   
  0.903
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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