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Mettu_3240 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3240" - PFAM: Cytochrome c, class I in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3240PFAM- Cytochrome c, class I; KEGG- nmu-Nmul_A2702 cytochrome c, class I (92 aa)    
Predicted Functional Partners:
Mettu_3239
PFAM- Cytochrome d1, haem region; Cytochrome c, class I; KEGG- rme-Rmet_3331 cytochrome d1, heme region (526 aa)
 
   
  0.851
Mettu_3241
KEGG- cti-RALTA_B2050 C-type cytochrome c55X precursor (101 aa)
       
  0.778
Mettu_2264
KEGG- azo-azo2342 putative cytochrome c4 (197 aa)
   
          0.754
Mettu_3242
KEGG- mfa-Mfla_0366 hypothetical protein (174 aa)
              0.731
Mettu_4324
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- mca-MCA2155 sulfide-quinone reductase (426 aa)
     
  0.690
Mettu_3573
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- noc-Noc_2006 putative oxidoreductase (417 aa)
     
  0.690
Mettu_0616
Ferredoxin--NAD(+) reductase; KEGG- ote-Oter_2142 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase (401 aa)
     
  0.690
Mettu_0173
PFAM- Cytochrome c1; KEGG- noc-Noc_0297 cytochrome c1 (240 aa)
   
 
  0.663
Mettu_3886
KEGG- ach-Achl_3909 hypothetical protein; PFAM- Fibronectin, type III; WD40 repeat, subgroup; SMART- Fibronectin, type III; WD40 repeat (3056 aa)
       
    0.618
Mettu_0174
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (468 aa)
 
   
  0.596
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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