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Mettu_3243 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3243" - Cytochrome d1 heme region in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3243Cytochrome d1 heme region (387 aa)    
Predicted Functional Partners:
Mettu_3245
Putative transcriptional regulator, AsnC family (165 aa)
 
   
  0.983
Mettu_3248
Radical SAM domain protein (378 aa)
   
  0.983
Mettu_3246
Putative transcriptional regulator, AsnC family (147 aa)
 
   
  0.983
Mettu_3247
Putative transcriptional regulator, AsnC family (184 aa)
 
   
  0.981
Mettu_3244
AsnC family transcriptional regulator (152 aa)
 
   
  0.980
Mettu_3241
C-type cytochrome c55X (101 aa)
 
 
  0.961
Mettu_3239
Cytochrome d1 heme region (526 aa)
 
 
0.856
Mettu_3242
Putative uncharacterized protein (174 aa)
              0.648
pqqE
Pyrroloquinoline quinone biosynthesis protein E (375 aa)
   
   
  0.575
Mettu_3240
Cytochrome c class I (92 aa)
              0.562
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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