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Mettu_3251 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3251" - Probable transcriptional regulatory protein Mettu_3251 in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3251Probable transcriptional regulatory protein Mettu_3251; KEGG- maq-Maqu_2154 hypothetical protein; HAMAP- Protein of unknown function DUF28; PFAM- Protein of unknown function DUF28 (238 aa)    
Predicted Functional Partners:
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (536 aa)
     
      0.671
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (672 aa)
   
 
  0.628
aspS
Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (596 aa)
 
   
  0.559
Mettu_0089
PFAM- Protein of unknown function DUF1415; KEGG- svo-SVI_3066 hypothetical protein (188 aa)
   
          0.520
Mettu_3252
PFAM- Glycosyl transferase, family 2; KEGG- tkm-TK90_0471 glycosyl transferase family 2 (256 aa)
              0.471
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
 
  0.463
Mettu_3250
Cytokinin riboside 5’-monophosphate phosphoribohydrolase; KEGG- rfr-Rfer_3142 hypothetical protein; TIGRFAM- Conserved hypothetical protein CHP00730; PFAM- Conserved hypothetical protein CHP00730; Belongs to the LOG family (196 aa)
   
        0.460
Mettu_2962
Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (306 aa)
 
   
  0.458
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (477 aa)
       
    0.446
Mettu_3558
PFAM- Peptidase M23; KEGG- nhl-Nhal_1103 peptidase M23 (490 aa)
     
      0.444
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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