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Mettu_3280 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3280" - KEGG: tbd:Tbd_2145 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3280KEGG- tbd-Tbd_2145 hypothetical protein (262 aa)    
Predicted Functional Partners:
Mettu_0432
PFAM- Hemin uptake protein hemP; KEGG- meh-M301_2531 hemin uptake protein HemP (65 aa)
   
          0.714
Mettu_0435
PFAM- Hemin uptake protein hemP; KEGG- meh-M301_2531 hemin uptake protein HemP (65 aa)
   
          0.620
Mettu_1960
KEGG- bgf-BC1003_0018 TniB family protein; PFAM- Bacterial TniB; SMART- ATPase, AAA+ type, core (323 aa)
   
          0.520
Mettu_1981
KEGG- bgf-BC1003_0019 hypothetical protein (259 aa)
   
          0.456
Mettu_2883
KEGG- mxa-MXAN_6368 hypothetical protein (160 aa)
   
          0.451
Mettu_3279
Protein-glutamate methylesterase; SMART- MCP methyltransferase, CheR-type; PAS; PAC motif; TIGRFAM- PAS; KEGG- geo-Geob_3789 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM- Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-3 (976 aa)
              0.444
Mettu_1984
KEGG- bgf-BC1003_0019 hypothetical protein (602 aa)
   
          0.433
Mettu_0518
PFAM- Protein of unknown function DUF2171; KEGG- mfa-Mfla_2659 hypothetical protein (79 aa)
   
          0.432
Mettu_1980
TniB family protein; PFAM- Bacterial TniB; KEGG- bgf-BC1003_0018 TniB family protein (324 aa)
   
          0.429
Mettu_3281
SMART- DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM- DNA topoisomerase III, bacterial-type; KEGG- wch-wcw_0920 DNA topoisomerase III; PFAM- DNA topoisomerase, type IA, central; Toprim domain (789 aa)
              0.426
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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