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Mettu_3285 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3285" - KEGG: nhl:Nhal_3499 RNP-1 like RNA-binding protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3285KEGG- nhl-Nhal_3499 RNP-1 like RNA-binding protein; PFAM- RNA recognition motif, RNP-1; SMART- RNA recognition motif, RNP-1 (88 aa)    
Predicted Functional Partners:
Mettu_1419
KEGG- mmw-Mmwyl1_1536 RNP-1 like RNA-binding protein; PFAM- RNA recognition motif, RNP-1; SMART- RNA recognition motif, RNP-1 (86 aa)
   
          0.783
Mettu_4376
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family (550 aa)
     
  0.780
Mettu_0730
KEGG- svo-SVI_3119 serine/threonine protein kinase; PFAM- Serine/threonine-protein kinase-like domain; Leucine-rich repeat; SMART- Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Leucine-rich repeat, typical subtype (448 aa)
   
 
  0.746
Mettu_3886
KEGG- ach-Achl_3909 hypothetical protein; PFAM- Fibronectin, type III; WD40 repeat, subgroup; SMART- Fibronectin, type III; WD40 repeat (3056 aa)
   
  0.719
Mettu_4048
PFAM- RNA-metabolising metallo-beta-lactamase; KEGG- pap-PSPA7_1526 hypothetical protein (466 aa)
     
  0.704
Mettu_0421
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (193 aa)
   
  0.694
Mettu_3284
KEGG- tgr-Tgr7_0172 cold-shock DNA-binding domain protein; PFAM- Cold-shock protein, DNA-binding; SMART- Cold shock protein (68 aa)
   
    0.662
Mettu_1173
KEGG- pna-Pnap_4661 hypothetical protein (363 aa)
     
  0.626
Mettu_4189
TIGRFAM- RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM- Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG- mca-MCA1482 ATP-dependent helicase HrpA; SMART- DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal (1315 aa)
     
  0.625
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (342 aa)
     
    0.622
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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