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Mettu_3307 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3307" - KEGG: mpo:Mpop_1517 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3307KEGG- mpo-Mpop_1517 hypothetical protein (500 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
 
  0.889
Mettu_3612
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (704 aa)
       
  0.844
Mettu_3308
Probable membrane transporter protein; PFAM- Protein of unknown function DUF81; KEGG- rpa-RPA3560 hypothetical protein (261 aa)
              0.806
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
   
   
  0.751
rpsI
PFAM- Ribosomal protein S9; KEGG- mca-MCA0905 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (131 aa)
     
 
  0.734
Mettu_3583
PFAM- Lytic transglycosylase-like, catalytic; KEGG- lytic transglycosylase catalytic (366 aa)
   
          0.734
Mettu_0339
KEGG- mca-MCA1689 hypothetical protein (428 aa)
   
     
  0.711
rpmF
TIGRFAM- Ribosomal protein L32p; HAMAP- Ribosomal protein L32p; KEGG- sde-Sde_1626 50S ribosomal protein L32; PFAM- Ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family (60 aa)
       
 
  0.711
rpsL
30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (124 aa)
       
 
  0.708
rpsU
TIGRFAM- Ribosomal protein S21; HAMAP- Ribosomal protein S21; KEGG- mca-MCA2991 ribosomal protein S21; PFAM- Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family (77 aa)
       
 
  0.706
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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