STRINGSTRING
Mettu_3319 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3319" - Phytanoyl-CoA dioxygenase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3319Phytanoyl-CoA dioxygenase (346 aa)    
Predicted Functional Partners:
Mettu_1111
Putative uncharacterized protein (350 aa)
          0.910
Mettu_3318
Helix-turn-helix, AraC domain protein (268 aa)
              0.801
Mettu_1108
Aspartyl/Asparaginyl beta-hydroxylase (395 aa)
 
          0.761
Mettu_1110
Putative uncharacterized protein (334 aa)
 
          0.741
Mettu_1107
GCN5-related N-acetyltransferase (169 aa)
 
          0.732
Mettu_1105
Tail Collar domain protein (223 aa)
 
          0.608
Mettu_3522
Putative ATP-dependent helicase (680 aa)
   
          0.569
Mettu_1887
Putative uncharacterized protein (208 aa)
   
          0.564
Mettu_3317
Putative uncharacterized protein (154 aa)
              0.557
Mettu_2834
Putative uncharacterized protein (75 aa)
   
          0.514
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (19%) [HD]