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STRINGSTRING
Mettu_3320 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3320" - KEGG: hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3320KEGG- hypothetical protein (109 aa)    
Predicted Functional Partners:
Mettu_0123
KEGG- mmb-Mmol_2026 hypothetical protein (528 aa)
   
          0.520
Mettu_3258
PFAM- Protein of unknown function DUF748; KEGG- nde-NIDE1873 hypothetical protein (980 aa)
 
          0.477
Mettu_3180
PFAM- Fatty acid desaturase, type 1; KEGG- mxa-MXAN_3390 fatty acid desaturase family protein (425 aa)
   
          0.429
Mettu_3130
PFAM- Protein of unknown function DUF2070, membrane; KEGG- antibiotic biosynthesis protein (535 aa)
   
          0.418
Mettu_0168
Uncharacterized protein; KEGG- mca-MCA0060 general secretion pathway protein B, putative (252 aa)
   
          0.408
Mettu_0425
KEGG- hypothetical protein (579 aa)
   
          0.401
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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