• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3330 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3330" - KEGG: psa:PST_1329 nitrogen fixation protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3330KEGG- psa-PST_1329 nitrogen fixation protein; TIGRFAM- NifT/FixU; PFAM- NifT/FixU (74 aa)    
Predicted Functional Partners:
Mettu_3333
KEGG- alv-Alvin_1875 hypothetical protein (88 aa)
 
          0.973
Mettu_3332
Nitrogen fixation protein NifX; KEGG- alv-Alvin_1876 dinitrogenase iron-molybdenum cofactor biosynthesis protein; TIGRFAM- Nitrogen fixation protein NifX; PFAM- Dinitrogenase iron-molybdenum cofactor biosynthesis (236 aa)
 
     
  0.968
Mettu_3334
PFAM- LRV FeS4 cluster; Leucine rich repeat variant; KEGG- ttu-TERTU_1543 leucine rich repeat domain protein (255 aa)
 
          0.967
Mettu_3335
KEGG- mca-MCA2833 hypothetical protein (320 aa)
 
          0.920
Mettu_3329
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family (523 aa)
 
     
  0.899
Mettu_3331
PFAM- 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG- azo-azo0542 FdxN protein (66 aa)
         
  0.884
nifW
Nitrogenase-stabilizing/protective protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage (105 aa)
 
     
  0.863
Mettu_3414
KEGG- avn-Avin_51010 nitrogenase cofactor biosynthesis protein; TIGRFAM- Nitrogenase cofactor biosynthesis protein NifB; PFAM- Dinitrogenase iron-molybdenum cofactor biosynthesis; Radical SAM (496 aa)
 
     
  0.854
Mettu_3328
KEGG- slt-Slit_0882 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM- Nitrogenase molybdenum-iron protein alpha chain; Nitrogenase component 1, alpha chain; PFAM- Nitrogenase/oxidoreductase, component 1 (493 aa)
 
     
  0.846
Mettu_3345
Nitrogen fixation protein NifX; KEGG- avn-Avin_01480 nitrogenase MoFe cofactor biosynthesis protein NifX; TIGRFAM- Nitrogen fixation protein NifX; PFAM- Dinitrogenase iron-molybdenum cofactor biosynthesis (143 aa)
 
     
  0.818
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]