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Mettu_3333 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3333" - KEGG: alv:Alvin_1875 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3333KEGG- alv-Alvin_1875 hypothetical protein (88 aa)    
Predicted Functional Partners:
Mettu_3330
KEGG- psa-PST_1329 nitrogen fixation protein; TIGRFAM- NifT/FixU; PFAM- NifT/FixU (74 aa)
 
          0.973
Mettu_3334
PFAM- LRV FeS4 cluster; Leucine rich repeat variant; KEGG- ttu-TERTU_1543 leucine rich repeat domain protein (255 aa)
 
          0.969
Mettu_3335
KEGG- mca-MCA2833 hypothetical protein (320 aa)
 
          0.949
Mettu_3332
Nitrogen fixation protein NifX; KEGG- alv-Alvin_1876 dinitrogenase iron-molybdenum cofactor biosynthesis protein; TIGRFAM- Nitrogen fixation protein NifX; PFAM- Dinitrogenase iron-molybdenum cofactor biosynthesis (236 aa)
 
          0.933
Mettu_3331
PFAM- 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG- azo-azo0542 FdxN protein (66 aa)
              0.862
Mettu_3326
KEGG- dar-Daro_1418 hypothetical protein (279 aa)
   
          0.780
Mettu_3386
KEGG- slt-Slit_0809 hypothetical protein (171 aa)
   
          0.776
Mettu_3354
KEGG- psa-PST_1324 hypothetical protein (189 aa)
   
          0.774
Mettu_3419
PFAM- Ferredoxin; KEGG- alv-Alvin_3042 ferredoxin (116 aa)
   
          0.771
Mettu_3418
PFAM- Ferredoxin; KEGG- mca-MCA0760 ferredoxin, 2Fe-2S (95 aa)
   
          0.721
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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