• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3379 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3379" - Flavodoxin in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3379Flavodoxin; Low-potential electron donor to a number of redox enzymes (177 aa)    
Predicted Functional Partners:
Mettu_3377
PFAM- Positive regulator of sigma(E), RseC/MucC; KEGG- tgr-Tgr7_1086 positive regulator of sigma E, RseC/MucC (145 aa)
 
          0.863
Mettu_3378
PFAM- Rieske [2Fe-2S] iron-sulphur domain; KEGG- dar-Daro_1421 Rieske (2Fe-2S) region (137 aa)
              0.845
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
   
   
  0.830
Mettu_3375
KEGG- avn-Avin_40900 hypothetical protein (98 aa)
 
          0.819
Mettu_3376
KEGG- avn-Avin_22580 hypothetical protein (99 aa)
              0.807
Mettu_1143
Cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids (178 aa)
         
  0.664
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily (164 aa)
     
   
  0.638
Mettu_3380
KEGG- mca-MCA0259 glutaredoxin-related protein; TIGRFAM- Glutaredoxin-related protein; PFAM- Glutaredoxin; BolA-like protein; Belongs to the BolA/IbaG family (202 aa)
   
   
  0.541
fur
PFAM- Ferric-uptake regulator; KEGG- mca-MCA2623 ferric uptake regulation protein; Belongs to the Fur family (139 aa)
   
   
  0.502
nifW
Nitrogenase-stabilizing/protective protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage (105 aa)
 
     
  0.495
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]