Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
NifZ family protein (159 aa)
Predicted Functional Partners:
Peptidylprolyl isomerase (292 aa)
Nitrogenase-stabilizing/protective protein NifW ; May protect the nitrogenase Fe-Mo protein from oxidative damage (105 aa)
Putative uncharacterized protein (171 aa)
Nitrogenase cofactor biosynthesis protein NifB (496 aa)
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN (465 aa)
Nitrogen fixation protein NifX (143 aa)
Nitrogen fixation protein (157 aa)
Putative uncharacterized protein (279 aa)
Ferredoxin III, nif-specific (105 aa)
ATP-dependent Clp protease ATP-binding subunit ClpX ; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (423 aa)
Your Current Organism:
NCBI taxonomy Id: 697282 Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96