STRINGSTRING
Mettu_3390 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3390" - Cysteine desulfurase NifS in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3390Cysteine desulfurase NifS (402 aa)    
Predicted Functional Partners:
Mettu_3391
Nitrogen fixation protein NifU ; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (301 aa)
 
  0.999
Mettu_2993
SUF system FeS assembly protein, NifU family (150 aa)
 
  0.999
Mettu_3227
UBA/THIF-type NAD/FAD binding protein (248 aa)
 
  0.994
Mettu_1216
SirA-like domain-containing protein (76 aa)
     
  0.982
Mettu_0027
Transcriptional regulator, BadM/Rrf2 family (157 aa)
 
 
  0.974
Mettu_2276
Cysteine desulfurase (685 aa)
   
 
0.972
Mettu_2994
Cysteine desulfurase ; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (407 aa)
   
 
0.972
Mettu_3569
3-mercaptopyruvate sulfurtransferase (281 aa)
     
  0.964
birA
Biotin-[acetyl-CoA carboxylase] synthetase ; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (332 aa)
       
  0.934
dnaK
Heat shock protein 70 ; Acts as a chaperone (644 aa)
 
 
  0.932
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (10%) [HD]