• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3393 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3393" - KEGG: azo:azo3367 putative NifZ protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3393KEGG- azo-azo3367 putative NifZ protein (87 aa)    
Predicted Functional Partners:
Mettu_3391
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (301 aa)
              0.551
Mettu_3392
KEGG- slt-Slit_0804 iron-sulfur cluster assembly accessory protein; TIGRFAM- FeS cluster insertion; PFAM- FeS cluster biogenesis; Belongs to the HesB/IscA family (118 aa)
              0.538
Mettu_3390
Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine (402 aa)
              0.465
Mettu_3394
annotation not available (57 aa)
              0.407
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (10%) [HD]