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STRINGSTRING
Mettu_3395 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3395" - PFAM: Nitroreductase-like in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3395PFAM- Nitroreductase-like; KEGG- nhl-Nhal_2027 hypothetical protein (544 aa)    
Predicted Functional Partners:
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (464 aa)
       
  0.891
Mettu_3416
KEGG- cyc-PCC7424_1840 nitrogenase-associated protein; TIGRFAM- Nitrogenase-associated protein; PFAM- Arsenate reductase-like; Belongs to the ArsC family (140 aa)
          0.866
Mettu_3356
Thiosulfate sulfurtransferase GlpE; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide (102 aa)
          0.791
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (963 aa)
       
    0.767
Mettu_3355
AAA ATPase central domain protein; PFAM- ATPase, AAA-type, core; KEGG- mca-MCA0262 AAA family ATPase (575 aa)
 
        0.701
Mettu_3375
KEGG- avn-Avin_40900 hypothetical protein (98 aa)
   
          0.641
Mettu_3351
KEGG- mca-MCA0257 hypothetical protein (166 aa)
   
          0.606
Mettu_3372
PFAM- Glutathione S-transferase, N-terminal; KEGG- mca-MCA1303 glutathione S-transferase (206 aa)
 
          0.597
Mettu_3386
KEGG- slt-Slit_0809 hypothetical protein (171 aa)
   
          0.584
Mettu_3334
PFAM- LRV FeS4 cluster; Leucine rich repeat variant; KEGG- ttu-TERTU_1543 leucine rich repeat domain protein (255 aa)
   
          0.509
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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