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Mettu_3444 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3444" - PFAM: Protein of unknown function DUF404, bacteria N-terminal in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3444PFAM- Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG- tgr-Tgr7_1012 protein of unknown function DUF404 (483 aa)    
Predicted Functional Partners:
Mettu_3443
PFAM- Protein of unknown function DUF403, bacteria; KEGG- tgr-Tgr7_1013 protein of unknown function DUF403 (312 aa)
   
  0.992
Mettu_3449
KEGG- meh-M301_0029 transglutaminase domain protein; PFAM- Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART- Transglutaminase-like (314 aa)
 
   
  0.896
Mettu_3442
annotation not available (47 aa)
              0.845
Mettu_3446
Uncharacterized protein; KEGG- tgr-Tgr7_1014 transglutaminase domain protein; PFAM- Protein of unknown function DUF2126; Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART- Transglutaminase-like (1128 aa)
   
  0.829
Mettu_3454
Transglutaminase domain-containing protein; KEGG- hch-HCH_03352 putative cysteine protease; PFAM- Transglutaminase-like; SMART- Transglutaminase-like (264 aa)
 
   
  0.808
Mettu_0625
KEGG- meh-M301_0039 transglutaminase domain protein; PFAM- Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART- Transglutaminase-like (287 aa)
 
   
  0.802
Mettu_3450
KEGG- tgr-Tgr7_1017 hypothetical protein (251 aa)
 
        0.771
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family (480 aa)
     
 
    0.631
Mettu_3441
PFAM- GCN5-related N-acetyltransferase; KEGG- avn-Avin_46600 GCN5-related N-acetyltransferase (149 aa)
       
    0.499
Mettu_3448
PFAM- Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; Protein of unknown function DUF403, bacteria; KEGG- meh-M301_0028 protein of unknown function DUF404 (853 aa)
 
   
0.474
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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