STRINGSTRING
Mettu_3448 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3448" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3448Putative uncharacterized protein (853 aa)    
Predicted Functional Partners:
Mettu_3449
Transglutaminase domain-containing protein (314 aa)
 
        0.989
Mettu_3446
Putative uncharacterized protein (1128 aa)
 
        0.955
Mettu_3450
Putative uncharacterized protein (251 aa)
 
        0.935
Mettu_3454
Transglutaminase domain-containing protein (264 aa)
 
        0.929
Mettu_0625
Transglutaminase domain-containing protein (287 aa)
 
        0.929
Mettu_2969
Transglutaminase domain-containing protein (148 aa)
   
        0.694
Mettu_2337
Transglutaminase domain-containing protein (653 aa)
   
        0.694
Mettu_3443
Putative uncharacterized protein (312 aa)
 
     
0.676
Mettu_3447
Citrate synthase (434 aa)
              0.644
Mettu_3444
Putative uncharacterized protein (483 aa)
 
     
0.591
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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