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Mettu_3458 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3458" - SMART: ATPase, AAA+ type, core in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3458SMART- ATPase, AAA+ type, core; KEGG- hch-HCH_02652 type II secretory pathway ATPase ExeA (373 aa)    
Predicted Functional Partners:
Mettu_1363
PFAM- Type II/III secretion system; Secretin, N-terminal; Secretin/TonB, short N-terminal; KEGG- sbm-Shew185_0484 pilus (MSHA type) biogenesis protein MshL (554 aa)
 
        0.475
Mettu_3893
PFAM- Lipopolysaccharide biosynthesis; KEGG- nde-NIDE2408 putative lipopolysaccharide biosynthesis protein (577 aa)
 
          0.465
Mettu_3215
KEGG- tgr-Tgr7_3265 type II secretory pathway pseudopilin PulG (277 aa)
 
          0.434
Mettu_4241
KEGG- nmu-Nmul_A0242 polysaccharide export protein; TIGRFAM- Polysaccharide export EpsE; PFAM- Polysaccharide export protein; Soluble ligand binding domain (271 aa)
 
          0.433
Mettu_1361
KEGG- MshA biogenesis protein, MshJ-like protein (211 aa)
 
     
  0.429
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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