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STRINGSTRING
Mettu_3473 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3473" - Uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3473Uncharacterized protein; KEGG- lhk-LHK_01548 virulence gene repressor RsaL (98 aa)    
Predicted Functional Partners:
Mettu_3472
PFAM- Filamentation induced by cAMP/death on curing, related; KEGG- dde-Dde_2494 hypothetical protein (338 aa)
              0.848
Mettu_4252
KEGG- noc-Noc_0284 hypothetical protein (103 aa)
 
 
 
  0.805
Mettu_2887
KEGG- pen-PSEEN5346 hypothetical protein (267 aa)
   
          0.484
Mettu_3182
KEGG- noc-Noc_1094 hypothetical protein (195 aa)
   
          0.479
Mettu_1060
PFAM- Metal-dependent phosphohydrolase, HD region, subdomain; KEGG- ctt-CtCNB1_0064 HD phosphohydrolase-like protein (194 aa)
   
          0.448
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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