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Mettu_3478 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3478" - Glucosylceramidase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3478Glucosylceramidase (449 aa)    
Predicted Functional Partners:
Mettu_4338
Beta-glucosidase (733 aa)
 
    0.787
Mettu_0405
Putative uncharacterized protein (1088 aa)
 
          0.780
Mettu_3122
Glycosyltransferase, MGT family (455 aa)
   
   
    0.553
Mettu_0634
Glycosyl transferase family 2 (876 aa)
       
    0.506
Mettu_1728
TonB-dependent receptor (853 aa)
   
          0.455
Mettu_3480
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
              0.431
Mettu_3479
Dihydroorotate oxidase ; Catalyzes the conversion of dihydroorotate to orotate (337 aa)
              0.431
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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