• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3501 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3501" - KEGG: response regulator receiver in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3501KEGG- response regulator receiver; PFAM- Signal transduction response regulator, receiver region; ANTAR; SMART- Signal transduction response regulator, receiver region (201 aa)    
Predicted Functional Partners:
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (464 aa)
       
  0.924
Mettu_3502
TIGRFAM- PAS; PFAM- CHASE; MASE1; PAS fold; Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG- hch-HCH_02179 signal transduction histidine kinase; SMART- PAS; PAC motif (1163 aa)
 
     
  0.921
Mettu_0348
KEGG- dal-Dalk_0659 response regulator receiver protein; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region (129 aa)
    
          0.679
Mettu_2339
KEGG- mei-Msip34_1162 two component transcriptional regulator, winged helix family; PFAM- Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART- Signal transduction response regulator, receiver region (229 aa)
    
          0.661
Mettu_3161
PFAM- Extracellular ligand-binding receptor; KEGG- gca-Galf_2118 putative aliphatic amidase expression-regulating protein (407 aa)
   
 
  0.650
Mettu_0119
TIGRFAM- ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system; KEGG- mca-MCA1278 hypothetical protein (397 aa)
   
 
  0.650
Mettu_2166
KEGG- bgl-bglu_2g19900 response regulator receiver domain protein (CheY-like); PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region (123 aa)
    
          0.648
Mettu_0909
Putative PAS/PAC sensor protein; TIGRFAM- PAS; PFAM- Sporulation stage II, protein E C-terminal; PAS fold; PAS fold-3; KEGG- nhl-Nhal_0454 PAS sensor protein; SMART- Protein phosphatase 2C-related; PAS; PAC motif (760 aa)
         
  0.584
Mettu_2006
KEGG- mei-Msip34_1162 two component transcriptional regulator, winged helix family; PFAM- Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART- Signal transduction response regulator, receiver region (229 aa)
    
          0.549
Mettu_1574
KEGG- lhk-LHK_00888 sensor protein; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (659 aa)
  
          0.546
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >