• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3513 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3513" - PFAM: Polysaccharide biosynthesis protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3513PFAM- Polysaccharide biosynthesis protein; KEGG- sth-STH2704 polysaccharide biosynthesis protein (439 aa)    
Predicted Functional Partners:
Mettu_1366
KEGG- azo-azo1214 hypothetical protein (172 aa)
    
          0.778
Mettu_3509
PFAM- Glycosyl transferase, group 1; KEGG- rva-Rvan_3115 glycosyl transferase group 1 (400 aa)
 
   
  0.773
Mettu_3512
PFAM- Methyltransferase type 11; KEGG- shl-Shal_1398 methyltransferase type 12 (314 aa)
 
          0.756
Mettu_0411
KEGG- app-CAP2UW1_1888 phospholipase D/transphosphatidylase (530 aa)
    
          0.747
Mettu_0339
KEGG- mca-MCA1689 hypothetical protein (428 aa)
    
        0.745
Mettu_1971
KEGG- fjo-Fjoh_1154 hypothetical protein (375 aa)
    
          0.742
Mettu_4284
PFAM- Protein of unknown function DUF214, permase predicted; KEGG- rca-Rcas_2537 hypothetical protein (804 aa)
    
          0.739
Mettu_3424
BaaA2; KEGG- baaA2; trimeric autotransporter adhesin (319 aa)
    
          0.737
Mettu_1649
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- TonB-dependent receptor plug (837 aa)
    
          0.729
Mettu_1970
KEGG- plu-plu1837 hypothetical protein (578 aa)
    
          0.728
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >