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STRINGSTRING
Mettu_3532 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3532" - PFAM: Secretion protein HlyD in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3532PFAM- Secretion protein HlyD; KEGG- aca-ACP_0012 multidrug resistance protein MdtN (395 aa)    
Predicted Functional Partners:
Mettu_3533
PFAM- Fusaric acid resistance protein conserved region; KEGG- kva-Kvar_0766 fusaric acid resistance protein conserved region (755 aa)
 
  0.975
Mettu_3531
KEGG- aca-ACP_0013 hypothetical protein (89 aa)
              0.792
Mettu_3530
Protein CyaE; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) (509 aa)
 
  0.788
Mettu_2121
KEGG- nde-NIDE3240 putative multidrug resistance outer membrane protein; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (512 aa)
 
  0.786
Mettu_1459
Major facilitator superfamily MFS_1; KEGG- sde-Sde_3490 EmrB/QacA family drug resistance transporter; manually curated; PFAM- Major facilitator superfamily MFS-1 (513 aa)
 
  0.782
Mettu_2944
KEGG- min-Minf_0900 outer membrane component of tripartite multidrug resistance system; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (489 aa)
 
  0.775
Mettu_2945
Drug resistance transporter, EmrB/QacA subfamily; KEGG- nde-NIDE3241 putative multidrug resistance protein B; TIGRFAM- Drug resistance transporter EmrB/QacA subfamily; PFAM- Major facilitator superfamily MFS-1 (549 aa)
 
  0.771
Mettu_3934
KEGG- mca-MCA2258 EmrB/QacA family drug resistance transporter; TIGRFAM- Drug resistance transporter EmrB/QacA subfamily; PFAM- Major facilitator superfamily MFS-1 (521 aa)
 
  0.764
Mettu_2122
Drug resistance transporter, EmrB/QacA subfamily; KEGG- nde-NIDE3241 putative multidrug resistance protein B; TIGRFAM- Drug resistance transporter EmrB/QacA subfamily; PFAM- Major facilitator superfamily MFS-1 (531 aa)
 
  0.760
Mettu_3718
KEGG- NodT family RND efflux system, outer membrane lipoprotein; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (471 aa)
 
  0.630
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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