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tolB protein (Methylobacter tundripaludum) - STRING interaction network
"tolB" - Protein TolB in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBProtein TolB; Involved in the TonB-independent uptake of proteins (427 aa)    
Predicted Functional Partners:
Mettu_3543
KEGG- mca-MCA1230 OmpA family protein; TIGRFAM- Peptidoglycan-associated lipoprotein; PFAM- Outer membrane protein, OmpA/MotB, C-terminal; Belongs to the ompA family (191 aa)
 
 
  0.997
cpoB
Cell division coordinator CpoB; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division (285 aa)
 
   
  0.976
Mettu_3547
KEGG- mca-MCA1226 TolQ protein; TIGRFAM- Tol-Pal system, TolQ; PFAM- MotA/TolQ/ExbB proton channel (225 aa)
 
 
  0.967
Mettu_3546
KEGG- mca-MCA1227 TolR protein; TIGRFAM- Biopolymer transport, TolR; PFAM- Biopolymer transport protein ExbD/TolR (142 aa)
 
 
  0.934
Mettu_3548
KEGG- mca-MCA1224 thioesterase family protein; TIGRFAM- Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM- Thioesterase superfamily (134 aa)
 
   
  0.855
Mettu_3545
Protein TolA; TIGRFAM- Tol-Pal system, TolA; KEGG- mca-MCA1228 TolA protein, putative (529 aa)
   
 
  0.852
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds (213 aa)
 
          0.797
Mettu_0774
PFAM- Outer membrane protein, OmpA/MotB, C-terminal; KEGG- mca-MCA3103 outer membrane protein MopB; Belongs to the ompA family (363 aa)
   
 
  0.792
queC
7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)); Belongs to the QueC family (225 aa)
              0.761
Mettu_3038
PFAM- Outer membrane protein, OmpA/MotB, C-terminal; KEGG- dal-Dalk_0230 OmpA/MotB domain protein; Belongs to the ompA family (396 aa)
   
 
  0.697
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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