Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Mettu_1042 | mutL | Mettu_1042 | Mettu_4349 | Single-stranded-DNA-specific exonuclease RecJ | DNA mismatch repair protein MutL ; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.647 |
| Mettu_1042 | queA | Mettu_1042 | Mettu_4058 | Single-stranded-DNA-specific exonuclease RecJ | Queuosine biosynthesis protein QueA ; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) | 0.654 |
| Mettu_1042 | recG | Mettu_1042 | Mettu_2546 | Single-stranded-DNA-specific exonuclease RecJ | ATP-dependent DNA helicase RecG ; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) | 0.791 |
| Mettu_1042 | ruvA | Mettu_1042 | Mettu_3550 | Single-stranded-DNA-specific exonuclease RecJ | Holliday junction ATP-dependent DNA helicase RuvA ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB | 0.870 |
| Mettu_1042 | ruvB | Mettu_1042 | Mettu_3549 | Single-stranded-DNA-specific exonuclease RecJ | Holliday junction ATP-dependent DNA helicase RuvB ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.887 |
| Mettu_1042 | ruvC | Mettu_1042 | Mettu_3551 | Single-stranded-DNA-specific exonuclease RecJ | Holliday junction resolvase RuvC ; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group | 0.817 |
| Mettu_3546 | Mettu_3547 | Mettu_3546 | Mettu_3547 | Protein TolR | Protein TolQ | 0.998 |
| Mettu_3546 | Mettu_3548 | Mettu_3546 | Mettu_3548 | Protein TolR | Tol-pal system-associated acyl-CoA thioesterase | 0.920 |
| Mettu_3546 | Mettu_3552 | Mettu_3546 | Mettu_3552 | Protein TolR | Probable transcriptional regulatory protein Mettu_3552 | 0.851 |
| Mettu_3546 | ruvA | Mettu_3546 | Mettu_3550 | Protein TolR | Holliday junction ATP-dependent DNA helicase RuvA ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB | 0.870 |
| Mettu_3546 | ruvB | Mettu_3546 | Mettu_3549 | Protein TolR | Holliday junction ATP-dependent DNA helicase RuvB ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.871 |
| Mettu_3546 | ruvC | Mettu_3546 | Mettu_3551 | Protein TolR | Holliday junction resolvase RuvC ; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group | 0.870 |
| Mettu_3547 | Mettu_3546 | Mettu_3547 | Mettu_3546 | Protein TolQ | Protein TolR | 0.998 |
| Mettu_3547 | Mettu_3548 | Mettu_3547 | Mettu_3548 | Protein TolQ | Tol-pal system-associated acyl-CoA thioesterase | 0.965 |
| Mettu_3547 | Mettu_3552 | Mettu_3547 | Mettu_3552 | Protein TolQ | Probable transcriptional regulatory protein Mettu_3552 | 0.862 |
| Mettu_3547 | ruvA | Mettu_3547 | Mettu_3550 | Protein TolQ | Holliday junction ATP-dependent DNA helicase RuvA ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB | 0.882 |
| Mettu_3547 | ruvB | Mettu_3547 | Mettu_3549 | Protein TolQ | Holliday junction ATP-dependent DNA helicase RuvB ; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.882 |
| Mettu_3547 | ruvC | Mettu_3547 | Mettu_3551 | Protein TolQ | Holliday junction resolvase RuvC ; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group | 0.882 |
| Mettu_3548 | Mettu_3546 | Mettu_3548 | Mettu_3546 | Tol-pal system-associated acyl-CoA thioesterase | Protein TolR | 0.920 |
| Mettu_3548 | Mettu_3547 | Mettu_3548 | Mettu_3547 | Tol-pal system-associated acyl-CoA thioesterase | Protein TolQ | 0.965 |
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