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Mettu_3552 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3552" - Probable transcriptional regulatory protein Mettu_3552 in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Mettu_3552Probable transcriptional regulatory protein Mettu_3552; TIGRFAM- Protein of unknown function DUF28; HAMAP- Protein of unknown function DUF28; KEGG- mca-MCA1220 hypothetical protein; PFAM- Protein of unknown function DUF28 (248 aa)    
Predicted Functional Partners:
ruvB
Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (344 aa)
 
     
  0.876
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (203 aa)
 
     
  0.873
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (165 aa)
   
   
  0.866
Mettu_3547
KEGG- mca-MCA1226 TolQ protein; TIGRFAM- Tol-Pal system, TolQ; PFAM- MotA/TolQ/ExbB proton channel (225 aa)
   
        0.780
Mettu_3548
KEGG- mca-MCA1224 thioesterase family protein; TIGRFAM- Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM- Thioesterase superfamily (134 aa)
         
  0.780
Mettu_3546
KEGG- mca-MCA1227 TolR protein; TIGRFAM- Biopolymer transport, TolR; PFAM- Biopolymer transport protein ExbD/TolR (142 aa)
   
        0.774
Mettu_3545
Protein TolA; TIGRFAM- Tol-Pal system, TolA; KEGG- mca-MCA1228 TolA protein, putative (529 aa)
              0.751
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (536 aa)
     
      0.671
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (427 aa)
   
 
  0.634
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (672 aa)
   
 
  0.628
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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