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Mettu_3563 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3563" - Very short patch repair endonuclease in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3563Very short patch repair endonuclease; May nick specific sequences that contain T-G mispairs resulting from m5C-deamination (142 aa)    
Predicted Functional Partners:
Mettu_3567
KEGG- rpf-Rpic12D_0206 DNA-cytosine methyltransferase; TIGRFAM- DNA methylase, C-5 cytosine-specific; PFAM- DNA methylase, C-5 cytosine-specific (359 aa)
   
  0.955
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (614 aa)
   
 
  0.868
Mettu_3564
KEGG- sbn-Sbal195_0370 hypothetical protein (597 aa)
              0.750
Mettu_3562
KEGG- app-CAP2UW1_0349 hypothetical protein (94 aa)
              0.593
Mettu_0078
KEGG- nhl-Nhal_3853 mutator MutT protein; TIGRFAM- Mutator MutT protein; PFAM- Thiamine monophosphate synthase; NUDIX hydrolase domain (307 aa)
 
       
  0.566
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
           
  0.457
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily (343 aa)
              0.437
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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