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STRINGSTRING
Mettu_3570 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3570" - PFAM: Protein of unknown function DUF820 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3570PFAM- Protein of unknown function DUF820; KEGG- nhl-Nhal_0133 protein of unknown function DUF820 (197 aa)    
Predicted Functional Partners:
Mettu_3411
PFAM- Protein of unknown function DUF433; KEGG- ava-Ava_1741 hypothetical protein (77 aa)
   
 
      0.742
Mettu_3862
PFAM- Protein of unknown function DUF820; KEGG- tmz-Tmz1t_3766 protein of unknown function DUF820 (191 aa)
   
          0.716
Mettu_1837
PFAM- Protein of unknown function DUF820; KEGG- tmz-Tmz1t_3766 protein of unknown function DUF820 (196 aa)
   
          0.707
Mettu_2995
PFAM- Protein of unknown function DUF820; KEGG- ter-Tery_4530 hypothetical protein (188 aa)
   
          0.690
Mettu_4123
PFAM- Protein of unknown function DUF820; KEGG- dfe-Dfer_4673 protein of unknown function DUF820 (203 aa)
   
          0.671
Mettu_1387
PFAM- Protein of unknown function DUF820; KEGG- dfe-Dfer_4673 protein of unknown function DUF820 (201 aa)
   
          0.627
Mettu_3571
PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG- mca-MCA1102 sigma-54 dependent transcriptional regulator; PFAM- RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART- ATPase, AAA+ type, core (452 aa)
              0.618
Mettu_2714
PFAM- Plasmid pRiA4b ORF-3-like; KEGG- cyn-Cyan7425_4772 hypothetical protein (419 aa)
   
          0.520
Mettu_3412
KEGG- slt-Slit_2475 hypothetical protein (110 aa)
   
          0.519
Mettu_3148
Transposase; Manually curated; KEGG- amr-AM1_2664 hypothetical protein (356 aa)
   
          0.516
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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