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STRINGSTRING
Mettu_3616 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3616" - PFAM: Protein of unknown function DUF502 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3616PFAM- Protein of unknown function DUF502; KEGG- tkm-TK90_2258 protein of unknown function DUF502 (202 aa)    
Predicted Functional Partners:
Mettu_2216
KEGG- mca-MCA0167 hypothetical protein; manually curated; PFAM- Protein of unknown function DUF502 (180 aa)
   
          0.749
Mettu_3615
KEGG- eba-ebA4129 hypothetical protein (78 aa)
              0.598
Mettu_3617
PFAM- Protein of unknown function DUF2171; KEGG- mfa-Mfla_2659 hypothetical protein (79 aa)
              0.423
Mettu_3614
KEGG- pna-Pnap_4859 cation diffusion facilitator family transporter; TIGRFAM- Cation efflux protein; PFAM- Cation efflux protein (300 aa)
              0.401
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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