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Mettu_3674 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3674" - Ribosomal RNA small subunit methyltransferase D in Methylobacter tundripaludum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Mettu_3674Ribosomal RNA small subunit methyltransferase D; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle (185 aa)    
Predicted Functional Partners:
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate; Belongs to the bacterial CoaD family (161 aa)
 
        0.905
Mettu_3675
PFAM- Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG- mca-MCA0064 hypothetical protein (439 aa)
   
        0.903
Mettu_3676
KEGG- mca-MCA0063 M16 family peptidase; PFAM- Peptidase M16, C-terminal; Peptidase M16, N-terminal; Belongs to the peptidase M16 family (455 aa)
   
        0.892
rlmD
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA (444 aa)
   
 
  0.738
prmC
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (284 aa)
 
 
  0.690
Mettu_0152
PFAM- O-methyltransferase, family 3; KEGG- nmu-Nmul_A0939 O-methyltransferase family protein (229 aa)
   
 
    0.679
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (293 aa)
 
        0.661
Mettu_1831
Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4’-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4’-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family (396 aa)
       
    0.628
rlmB
23S rRNA (guanosine-2’-O-)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA (248 aa)
 
 
  0.624
Mettu_2570
TIGRFAM- Pseudouridine synthase, RsuA and RluB/E/F; PFAM- RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG- nhl-Nhal_3572 RNA-binding S4 domain protein; SMART- RNA-binding S4; Belongs to the pseudouridine synthase RsuA family (279 aa)
   
        0.619
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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