STRINGSTRING
Mettu_3720 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3720" - Cyclic peptide transporter in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3720Cyclic peptide transporter (545 aa)    
Predicted Functional Partners:
Mettu_3721
Band 7 protein (348 aa)
 
          0.894
Mettu_3710
Amino acid adenylation domain protein (7729 aa)
 
   
  0.854
Mettu_3699
Amino acid adenylation domain protein (4114 aa)
 
   
  0.830
Mettu_3128
Amino acid adenylation domain protein (2629 aa)
 
   
  0.819
Mettu_3700
Amino acid adenylation domain protein (2911 aa)
 
   
  0.803
Mettu_3711
MbtH domain protein (78 aa)
 
        0.789
Mettu_3126
Amino acid adenylation domain protein (1810 aa)
 
   
  0.782
Mettu_3704
MbtH domain protein (195 aa)
 
        0.779
Mettu_3131
Amino acid adenylation domain protein (1768 aa)
 
   
  0.772
Mettu_3127
Amino acid adenylation domain protein (2224 aa)
 
   
  0.771
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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