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orn protein (Methylobacter tundripaludum) - STRING interaction network
"orn" - Oligoribonuclease in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
ornOligoribonuclease ; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (181 aa)    
Predicted Functional Partners:
crcB
Putative fluoride ion transporter CrcB ; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (235 aa)
              0.862
rnt
Exoribonuclease T ; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (207 aa)
     
  0.787
rnc
Ribonuclease III ; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (227 aa)
   
     
  0.785
Mettu_3791
Ribosome biogenesis GTPase RsgA ; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (295 aa)
   
   
  0.783
Mettu_3790
Ste24 endopeptidase (416 aa)
              0.759
Mettu_1557
Phosphoglucomutase (544 aa)
 
            0.756
Mettu_1482
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (144 aa)
 
      0.723
rne
Ribonuclease E ; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (819 aa)
   
     
  0.720
Mettu_3171
DNA polymerase III, epsilon subunit (241 aa)
   
  0.697
Mettu_4247
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (164 aa)
   
      0.663
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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