STRINGSTRING
Mettu_3792 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3792" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3792Putative uncharacterized protein (669 aa)    
Predicted Functional Partners:
Mettu_2396
Putative uncharacterized protein (275 aa)
   
          0.641
Mettu_3017
HopJ type III effector protein (125 aa)
   
          0.582
Mettu_0423
Putative uncharacterized protein (219 aa)
   
          0.545
Mettu_3791
Ribosome biogenesis GTPase RsgA ; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (295 aa)
              0.529
Mettu_3790
Ste24 endopeptidase (416 aa)
              0.529
Mettu_3024
Putative uncharacterized protein (157 aa)
   
          0.526
Mettu_3793
Oxidoreductase FAD/NAD(P)-binding domain protein (1230 aa)
              0.491
crcB
Putative fluoride ion transporter CrcB ; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (235 aa)
 
          0.488
Mettu_0730
Serine/threonine protein kinase (448 aa)
   
          0.453
orn
Oligoribonuclease ; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (181 aa)
              0.411
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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