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himA protein (Methylobacter tundripaludum) - STRING interaction network
"himA" - Integration host factor subunit alpha in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
himAIntegration host factor subunit alpha ; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (98 aa)    
Predicted Functional Partners:
pheT
Phenylalanyl-tRNA synthetase beta subunit (791 aa)
   
 
  0.976
Mettu_3801
Transcriptional regulator, MerR family (117 aa)
     
 
  0.937
pheS
Phenylalanyl-tRNA synthetase alpha subunit (339 aa)
   
 
  0.890
himD
Integration host factor subunit beta ; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (101 aa)
   
 
 
0.874
Mettu_4156
Histone family protein DNA-binding protein (103 aa)
   
 
 
0.853
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (438 aa)
   
 
 
  0.844
rpsT
30S ribosomal protein S20 ; Binds directly to 16S ribosomal RNA (87 aa)
         
  0.750
rpmI
50S ribosomal protein L35 (65 aa)
   
   
  0.739
rplT
50S ribosomal protein L20 ; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (120 aa)
              0.726
Mettu_2627
DNA-binding protein Fis ; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters (94 aa)
   
 
 
  0.721
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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