STRINGSTRING
Mettu_3821 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3821" - YcfA family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3821YcfA family protein (63 aa)    
Predicted Functional Partners:
Mettu_3822
Uncharacterized protein family UPF0150 (138 aa)
 
          0.952
Mettu_0811
Uncharacterized protein family UPF0150 (67 aa)
   
          0.648
Mettu_3820
Putative uncharacterized protein (192 aa)
              0.520
Mettu_3684
Putative uncharacterized protein (116 aa)
   
          0.467
Mettu_2279
Uncharacterized protein family UPF0150 (70 aa)
   
          0.461
Mettu_2051
Putative uncharacterized protein (89 aa)
   
          0.443
Mettu_3113
Putative uncharacterized protein (84 aa)
   
          0.439
Mettu_0806
Putative uncharacterized protein (86 aa)
   
          0.438
Mettu_2329
Putative uncharacterized protein (171 aa)
   
          0.432
Mettu_1500
Putative uncharacterized protein (793 aa)
   
          0.400
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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