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STRINGSTRING
Mettu_3826 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3826" - PFAM: Excinuclease ABC, C subunit, N-terminal in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3826PFAM- Excinuclease ABC, C subunit, N-terminal; KEGG- gur-Gura_2278 excinuclease ABC subunit C (93 aa)    
Predicted Functional Partners:
Mettu_3827
PFAM- Protein of unknown function DUF125, transmembrane; KEGG- hau-Haur_0273 hypothetical protein (230 aa)
              0.845
Mettu_3828
TIGRFAM- ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG- rba-RB4891 cadmium-transporting ATPase; PFAM- ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase (648 aa)
              0.826
Mettu_1946
PFAM- Excinuclease ABC, C subunit, N-terminal; KEGG- hch-HCH_06687 endonuclease (178 aa)
   
          0.761
Mettu_3830
PFAM- NUDIX hydrolase domain; KEGG- ote-Oter_2376 NUDIX hydrolase (168 aa)
              0.587
Mettu_3829
KEGG- mca-MCA1131 hypothetical protein; TIGRFAM- NGG1p interacting factor 3, NIF3; PFAM- NGG1p interacting factor 3, NIF3 (254 aa)
              0.577
Mettu_3825
PFAM- Uracil-DNA glycosylase-like; KEGG- tgr-Tgr7_1908 hypothetical protein (213 aa)
              0.501
mtgA
Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family (257 aa)
           
  0.437
Mettu_3831
annotation not available (49 aa)
              0.425
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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