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Mettu_3829 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3829" - KEGG: mca:MCA1131 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3829KEGG- mca-MCA1131 hypothetical protein; TIGRFAM- NGG1p interacting factor 3, NIF3; PFAM- NGG1p interacting factor 3, NIF3 (254 aa)    
Predicted Functional Partners:
Mettu_3830
PFAM- NUDIX hydrolase domain; KEGG- ote-Oter_2376 NUDIX hydrolase (168 aa)
              0.845
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
     
 
    0.785
Mettu_0913
Adenylate/guanylate cyclase with Chase sensor; PFAM- CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG- mgm-Mmc1_1858 adenylate/guanylate cyclase; SMART- Adenylyl cyclase class-3/4/guanylyl cyclase (744 aa)
       
    0.783
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (143 aa)
     
    0.721
folE
PFAM- GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM- GTP cyclohydrolase I; HAMAP- GTP cyclohydrolase I; KEGG- mca-MCA1670 GTP cyclohydrolase I (180 aa)
       
  0.685
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1364 aa)
         
  0.677
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (81 aa)
       
  0.671
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (337 aa)
       
  0.643
moaA
GTP 3’,8-cyclase; Catalyzes the cyclization of GTP to (8S)-3’,8-cyclo-7,8- dihydroguanosine 5’-triphosphate; Belongs to the radical SAM superfamily. MoaA family (334 aa)
       
    0.638
Mettu_0299
PFAM- 6-pyruvoyl tetrahydropterin synthase-related; KEGG- mca-MCA2527 6-pyruvoyl tetrahydropterin synthase, putative (134 aa)
       
    0.638
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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