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Mettu_3829 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3829" - GTP cyclohydrolase 1 type 2 homolog in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3829GTP cyclohydrolase 1 type 2 homolog (254 aa)    
Predicted Functional Partners:
Mettu_3830
NUDIX hydrolase (168 aa)
              0.859
Mettu_3831
Putative uncharacterized protein (49 aa)
              0.614
Mettu_3828
Heavy metal translocating P-type ATPase (648 aa)
              0.604
rpoD
Sigma-70 ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (602 aa)
     
 
  0.583
Mettu_3827
Putative uncharacterized protein (230 aa)
              0.582
Mettu_3826
Excinuclease ABC C subunit domain protein (93 aa)
              0.582
purE
5-(carboxyamino)imidazole ribonucleotide mutase ; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) (166 aa)
   
      0.555
rpoS
Sigma-38 (342 aa)
     
 
  0.550
Mettu_0145
Putative uncharacterized protein (240 aa)
   
        0.545
Mettu_3755
RNA polymerase, sigma 32 subunit, RpoH (448 aa)
     
 
  0.544
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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