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Mettu_3834 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3834" - Regulatory protein TetR in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3834Regulatory protein TetR (198 aa)    
Predicted Functional Partners:
Mettu_3833
Transcriptional regulator, LysR family (300 aa)
              0.763
Mettu_3832
Carbonate dehydratase ; Reversible hydration of carbon dioxide (194 aa)
              0.518
Mettu_1823
Putative uncharacterized protein (156 aa)
   
          0.488
Mettu_1737
Putative uncharacterized protein (110 aa)
   
          0.486
Mettu_0558
Putative uncharacterized protein (242 aa)
   
          0.473
Mettu_3024
Putative uncharacterized protein (157 aa)
   
          0.454
Mettu_3831
Putative uncharacterized protein (49 aa)
              0.451
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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