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Mettu_3850 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3850" - DNA-directed DNA polymerase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3850DNA-directed DNA polymerase (1164 aa)    
Predicted Functional Partners:
Mettu_3089
DNA polymerase III, subunits gamma and tau (540 aa)
 
  0.999
Mettu_3171
DNA polymerase III, epsilon subunit (241 aa)
     
  0.998
Mettu_1953
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (366 aa)
   
  0.998
Mettu_2187
DNA polymerase I (930 aa)
   
  0.994
Mettu_2688
DNA polymerase III, delta subunit (337 aa)
     
  0.994
Mettu_0829
DNA polymerase III, delta prime subunit (352 aa)
 
  0.991
Mettu_2524
DNA polymerase III chi subunit HolC (160 aa)
     
    0.964
Mettu_4247
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (164 aa)
   
 
  0.962
Mettu_4341
Pyruvate kinase (484 aa)
       
  0.945
Mettu_2431
Pyruvate kinase (481 aa)
       
  0.945
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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