STRINGSTRING
Mettu_3867 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3867" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3867Putative uncharacterized protein (178 aa)    
Predicted Functional Partners:
Mettu_4314
Transposase, putative (176 aa)
    
          0.778
Mettu_0498
Putative uncharacterized protein (178 aa)
    
          0.778
Mettu_0401
Transposase (131 aa)
    
          0.778
Mettu_0128
Putative uncharacterized protein (242 aa)
    
          0.757
Mettu_3866
ABC-type transporter, integral membrane subunit (456 aa)
              0.576
Mettu_3865
Nickel-transporting ATPase., Fe(3+)-transporting ATPase (534 aa)
              0.576
Mettu_3869
ABC-type transporter, periplasmic subunit (732 aa)
              0.574
Mettu_3868
ABC-type transporter, integral membrane subunit (325 aa)
              0.574
Mettu_3870
Enoyl-[acyl-carrier-protein] reductase [NADH] (260 aa)
              0.450
Mettu_1961
Putative uncharacterized protein (614 aa)
    
          0.432
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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