• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3883 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3883" - KEGG: nhl:Nhal_0015 formylmethanofuran dehydrogenase subunit B in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3883KEGG- nhl-Nhal_0015 formylmethanofuran dehydrogenase subunit B; TIGRFAM- Formylmethanofuran dehydrogenase, subunit B (419 aa)    
Predicted Functional Partners:
Mettu_3882
KEGG- nhl-Nhal_0014 formylmethanofuran dehydrogenase subunit A; TIGRFAM- Formylmethanofuran dehydrogenase, subunit A; PFAM- Amidohydrolase 3 (555 aa)
 
   
  0.994
Mettu_3879
TIGRFAM- Formylmethanofuran dehydrogenase subunit C; KEGG- nhl-Nhal_0012 formylmethanofuran dehydrogenase subunit C; PFAM- Glutamate synthase, alpha subunit, C-terminal (271 aa)
 
   
    0.990
ffsA
Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family (298 aa)
 
   
  0.983
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5- formyl-H(4)MPT; Belongs to the MCH family (327 aa)
 
   
  0.931
Mettu_2793
PFAM- ATP-grasp fold, DUF201-type; KEGG- nhl-Nhal_3875 protein of unknown function DUF201 (371 aa)
 
          0.812
Mettu_2796
PFAM- Triphosphoribosyl-dephospho-CoA protein; KEGG- mca-MCA2865 ATP-dephospho-CoA triphosphoribosyl transferase (282 aa)
 
          0.809
Mettu_0337
KEGG- mpt-Mpe_A2627 putative formaldehyde-activating enzyme; TIGRFAM- Formaldehyde-activating enzyme; PFAM- Formaldehyde-activating enzyme (183 aa)
 
          0.804
Mettu_2921
PFAM- Protein of unknown function DUF447; KEGG- mca-MCA1244 hypothetical protein (223 aa)
 
          0.804
Mettu_2800
H4MPT-linked C1 transfer pathway protein; KEGG- mca-MCA2869 S-layer protein, putative; TIGRFAM- Tetrahydromethanopterin-linked C1 transfer pathway, putative; PFAM- Hydantoinase/oxoprolinase (352 aa)
 
          0.802
Mettu_2798
PFAM- Histidine biosynthesis; KEGG- mca-MCA2867 HisA/HisF family protein, putative; Belongs to the HisA/HisF family (235 aa)
 
          0.801
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]