• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3895 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3895" - PFAM: Glycosyl transferase, family 2 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3895PFAM- Glycosyl transferase, family 2; KEGG- ade-Adeh_2775 glycosyl transferase family protein (292 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
       
  0.714
Mettu_1083
KEGG- pmy-Pmen_0549 sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; SMART- ATPase, AAA+ type, core (628 aa)
 
 
 
  0.689
Mettu_1098
KEGG- sku-Sulku_0590 hemolysin-type calcium-binding region (1077 aa)
   
 
  0.657
Mettu_3896
TIGRFAM- Asparagine synthase, glutamine-hydrolyzing; KEGG- bts-Btus_0702 asparagine synthase (glutamine-hydrolyzing); PFAM- Asparagine synthase; Glutamine amidotransferase, class-II (637 aa)
   
        0.652
Mettu_0314
KEGG- sat-SYN_02082 membrane carboxypeptidase (1047 aa)
         
  0.616
Mettu_3893
PFAM- Lipopolysaccharide biosynthesis; KEGG- nde-NIDE2408 putative lipopolysaccharide biosynthesis protein (577 aa)
 
     
  0.593
Mettu_4315
KEGG- cvi-CV_0742 hypothetical protein (336 aa)
   
          0.582
Mettu_3968
Cytochrome b561; KEGG- alv-Alvin_0021 cytochrome b561 (184 aa)
   
    0.562
Mettu_3683
KEGG- son-SO_2726 cytochrome b, putative (247 aa)
   
    0.562
Mettu_2256
Cytochrome b561; KEGG- app-CAP2UW1_2519 cytochrome b561 (239 aa)
   
    0.562
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (6%) [HD]