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STRINGSTRING
Mettu_3923 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3923" - PFAM: Alpha/beta hydrolase fold-1 in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3923PFAM- Alpha/beta hydrolase fold-1; KEGG- dol-Dole_1932 esterase/lipase-like protein (780 aa)    
Predicted Functional Partners:
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
 
 
  0.933
Mettu_1455
PFAM- AMP-dependent synthetase/ligase; KEGG- pub-SAR11_0422 putative long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase) (533 aa)
   
 
  0.865
Mettu_3922
Acetyl-CoA acetyltransferase; KEGG- azc-AZC_2972 thiolase; TIGRFAM- Thiolase; Belongs to the thiolase family (379 aa)
 
 
  0.759
Mettu_2277
PFAM- FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; KEGG- acp-A2cp1_3218 FAD linked oxidase domain protein (1224 aa)
   
 
  0.717
Mettu_3593
KEGG- scl-sce4605 hypothetical protein (290 aa)
   
     
  0.690
Mettu_3870
Enoyl-[acyl-carrier-protein] reductase [NADH]; KEGG- mca-MCA1263 enoyl-(acyl-carrier-protein) reductase (260 aa)
   
 
  0.666
Mettu_3300
PFAM- AMP-dependent synthetase/ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG- pfo-Pfl01_0436 AMP-dependent synthetase and ligase (603 aa)
 
  0.666
Mettu_0411
KEGG- app-CAP2UW1_1888 phospholipase D/transphosphatidylase (530 aa)
 
  0.625
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
  0.617
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (550 aa)
     
 
  0.597
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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