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Mettu_3936 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3936" - PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3936PFAM- Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG- mca-MCA2256 TetR family transcriptional regulator (204 aa)    
Predicted Functional Partners:
Mettu_3937
PFAM- Outer membrane efflux protein; KEGG- pol-Bpro_5561 outer membrane efflux protein (425 aa)
              0.845
Mettu_3938
PFAM- Secretion protein HlyD; KEGG- nde-NIDE0031 putative secretion protein HlyD (369 aa)
 
        0.806
Mettu_3941
PFAM- ABC-2 type transporter; KEGG- tcx-Tcr_1136 hypothetical protein (384 aa)
 
          0.803
Mettu_3940
PFAM- ABC-2 type transporter; KEGG- dal-Dalk_5053 ABC-2 type transporter (384 aa)
 
          0.803
Mettu_3939
Monosaccharide-transporting ATPase; PFAM- ABC transporter-like; KEGG- nde-NIDE0032 ABC transporter ATPase; SMART- ATPase, AAA+ type, core (654 aa)
              0.780
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (391 aa)
       
 
  0.599
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
  0.567
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
       
  0.553
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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