STRINGSTRING
Mettu_3936 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3936" - Transcriptional regulator, TetR family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3936Transcriptional regulator, TetR family (204 aa)    
Predicted Functional Partners:
Mettu_3937
Outer membrane efflux protein (425 aa)
         
  0.866
Mettu_3938
Secretion protein HlyD family protein (369 aa)
 
          0.812
Mettu_3941
ABC-2 type transporter (384 aa)
              0.787
Mettu_3940
ABC-2 type transporter (384 aa)
              0.783
Mettu_3939
Monosaccharide-transporting ATPase (654 aa)
              0.783
Mettu_3935
Secretion protein HlyD family protein (338 aa)
 
     
  0.688
Mettu_3934
Drug resistance transporter, EmrB/QacA subfamily (521 aa)
 
          0.648
Mettu_1458
Secretion protein HlyD family protein (391 aa)
 
     
  0.602
Mettu_2942
Secretion protein HlyD family protein (401 aa)
         
  0.539
Mettu_2120
Secretion protein HlyD family protein (408 aa)
         
  0.539
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (14%) [HD]