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glyS protein (Methylobacter tundripaludum) - STRING interaction network
"glyS" - TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
glySTIGRFAM- Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP- Glycyl-tRNA synthetase beta subunit; KEGG- mca-MCA2050 glycyl-tRNA synthetase, beta subunit (688 aa)    
Predicted Functional Partners:
glyQ
PFAM- Glycyl-tRNA synthetase, class IIc, alpha subunit; TIGRFAM- Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP- Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG- mca-MCA2049 glycyl-tRNA synthetase subunit alpha (304 aa)
  0.999
Mettu_3945
KEGG- sli-Slin_1472 ATPase-like protein (350 aa)
              0.777
Mettu_3946
KEGG- cpi-Cpin_2437 hypothetical protein (185 aa)
              0.774
aspS
Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps- L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily (596 aa)
   
   
  0.722
Mettu_3949
KEGG- mca-MCA2052 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; PFAM- Phospholipid/glycerol acyltransferase; SMART- Phospholipid/glycerol acyltransferase (248 aa)
              0.709
Mettu_3948
KEGG- mca-MCA2051 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM- Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM- Haloacid dehalogenase-like hydrolase (183 aa)
              0.709
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (943 aa)
 
   
  0.699
Mettu_2149
ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (257 aa)
   
        0.669
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (821 aa)
   
 
  0.658
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1289 aa)
     
   
  0.622
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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