• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3950 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3950" - KEGG: mca:MCA1881 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3950KEGG- mca-MCA1881 hypothetical protein (135 aa)    
Predicted Functional Partners:
Mettu_3949
KEGG- mca-MCA2052 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; PFAM- Phospholipid/glycerol acyltransferase; SMART- Phospholipid/glycerol acyltransferase (248 aa)
              0.534
Mettu_3948
KEGG- mca-MCA2051 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM- Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM- Haloacid dehalogenase-like hydrolase (183 aa)
              0.534
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (10%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >