STRINGSTRING
Mettu_3958 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3958" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3958Putative uncharacterized protein (148 aa)    
Predicted Functional Partners:
Mettu_3959
Putative uncharacterized protein (50 aa)
              0.805
Mettu_3957
Lytic transglycosylase catalytic (211 aa)
              0.712
purT
GAR transformylase 2 ; Catalyzes two reactions- the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP (400 aa)
              0.705
Mettu_3955
DNA mismatch repair protein MutS domain protein (532 aa)
              0.705
hemH
Protoheme ferro-lyase ; Catalyzes the ferrous insertion into protoporphyrin IX (322 aa)
              0.404
folE
GTP cyclohydrolase I (180 aa)
              0.403
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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