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Mettu_3960 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3960" - PFAM: Alpha/beta hydrolase fold-1 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3960PFAM- Alpha/beta hydrolase fold-1; KEGG- alpha/beta hydrolase fold protein (281 aa)    
Predicted Functional Partners:
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
     
 
  0.797
Mettu_2658
CoA-binding domain protein; PFAM- CoA-binding; GCN5-related N-acetyltransferase; KEGG- gca-Galf_1381 CoA-binding domain-containing protein (893 aa)
   
 
    0.783
Mettu_3961
PFAM- Protein of unknown function DUF6, transmembrane; KEGG- tbd-Tbd_1985 integral membrane protein, DUF6 (313 aa)
              0.770
Mettu_2618
TIGRFAM- Oxaloacetate decarboxylase, alpha subunit; KEGG- pmy-Pmen_2893 oxaloacetate decarboxylase; PFAM- Conserved carboxylase region; Pyruvate carboxyltransferase; Biotin/lipoyl attachment (601 aa)
       
  0.765
Mettu_3368
Bis(5’-nucleosyl)-tetraphosphatase; KEGG- alv-Alvin_2150 bis(5’nucleosyl)-tetraphosphatase ApaH (270 aa)
     
    0.645
apaH
Bis(5’-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (281 aa)
     
    0.645
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
   
  0.637
Mettu_3303
PFAM- Phosphopantetheine-binding; KEGG- acyl carrier protein (ACP1) (82 aa)
     
 
  0.631
Mettu_3302
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family (82 aa)
     
 
  0.631
Mettu_0824
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (76 aa)
     
 
  0.631
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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